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Links to Animal Genomics Research
Web Sites and Database Resources
Cattle
(Bos taurus)
NRSP-8 Cattle Coordination
Genome sequencing - Baylor
NCBI Cattle Resources
Ensembl cattle genome
UCSC Cattle Genome Browser
Arkdb: Cattle - Roslin, UK
Bovine Genome Database
(TXAM)
Ruminant Genome Biology Consortium
INRA Bovine map - France
Cattle GDB - Australia
Cattle SNP/Genome
(CSIRO)
Dairy Cattle QTL database
Cattle QTL Viewer
Iowa Stata U. CattleQTLdb
Gene Indices (GtGI)
Wageningen Cattle db
microRNA genes
Ortholog genes DB
Pigs
(Sus scrofa)
NRSP-8 Pig Coordination
Genome sequencing - Sanger
Genome at Pre-Ensembl
NCBI Pig Resources
Arkdb: Pig - Roslin, UK
ISU Pig QTLdb
Pig Cytogenetic map - France
PiGenome database - Korea
RH Map:
INRA, France
RH Map:
Reno, UNR
RH Map:
UIUC
Sino-Danmark Sequencing Project
Pig genome blast - NCBI
Gene Indices (SsGI)
PiGenome DB
(Korea)
Wageningen Pigs db
Chicken
(Gallus gallus)
NRSP-8: Chicken - Michigan
Genome sequencing - WUSTL
NCBI Chicken Resources
NIH Chicken Resources
Ensembl chicken genome
UCSC Chicken Genome Browser
ChickNet - Roslin, UK
ISU Chicken QTLdb
Chicken - Wageningen, NL
GMod Tracks - U.Del
ChickEST - Manchester, UK
Birdbase - U. of Arizona
Chicken RH Map - INRA
GEISHA proj - U. of Arizona
GallusReactome
Gene Indices (GgGI)
Wageningen Chicken db
microRNA genes
Ortholog genes DB
Taxonomy
NCBI Taxonomy DB
Catalogue of Life
GBIF Classification
Taxonomy databases
Sheep
(Ovis aries)
NRSP-8 Sheep Coordination
Internat'l Sheep Genome Consortium
NCBI Sheep Resources
UK Sheep Map - Roslin, UK
Arkdb: Sheep - Roslin, UK
Sheep - Melbourne, AU
Sheep BACend seq
(CSIRO)
Goat
(Capra hircus)
Goat Genome Consortium
Goat - INRA, France
NCBI Goat Resource
Goat Genome Database
Horse
(Equus caballus)
NRSP-8 Horse Coordination
NCBI Horse Genome
NCBI Horse Resources
Horse Transcriptome - Geogia
Horse Genetics, UC-Davis
Arkdb: Horse - Roslin, UK
Horse - INRA, France
Buffalo
BuffaloGenome.ORG
Water Buffalo Genome
(India)
Buffalo Genome Resource
(NCBI)
Buffalo genome db
(France)
Turkey
Arkdb: Turkey - Roslin, UK
Turkey genome - Minnesota
NCBI Tuekey Resources
Camel
Arabian Camel Genome
Rabbit
Rabbit Genome - INRA, France
NCBI Rabbit Resources
Cat
Cat Genome, Roslin, UK
NCBI Cat Resources
Dog
Dog - NCBI
DogMap Callaboration
Dog - UC-Berkerley
Dog - Univ. of Berne
Dog - FHCRC
Dog Gene Indices (DogGI)
Dog - RH Project
Animal Breeds
Domestic Animal Diversity Information System
DAD-IS
DAD-IS@cn
DAD@FAO.UN
Oklahoma State Univ
Wikipedia - cattle
Wikipedia - pig
Wikipedia - chicken
Wikipedia - sheep
Wikipedia - horse
Livestock Heritage
Aquaculture
NRSP-8 AquaGenomics
Catfish - Auburn, Alabama
CatfishGenome.ORG
(Auburn)
Catfish Gene Indices (CfGI)
FishBase - Japan
Fugu Genomics Project - UK
Fugu genome - Ensembl
KillifishGene Indices (FhGI)
Marine Genomics - MUSC
Medaka Genome - Japan
Oyster Genome Mapping - Rutgers
Pufferfish Genome - France
Rainbow Trout, INRA, France
Shrimp Map - CSIRO, Australia
Shrimp EST - Brasil
Shrimp Genetics 101
Salmon Gene Indices (AsGI)
Tetraodon Genome - Ensembl
Tilapia Genome - Univ. Maryland
Tilapia Genome Proj - Univ. of NH
Trout Gene Indices (RtGI)
ZebrafishGene Indices (ZGI)
Zebrafish (
ZFIN
|
Ensembl
|
NCBI
)
Mouse
Mouse - Jackson Lab
Mouse - NCBI
Mouse genome - NCBI
Mouse - Ensembl
Mouse Gene Indices (MGI)
Mouse Gene Family - Japan
Rat
Rat - NCBI
Rat - Ensembl
Rat - Medical College of Wisc.
Rat Gene Indices (RGI)
Fly
Fly Genetics: Harvard
Fly Genetics: Indiana
Drosophila - Berkeley
Drosophila Gene I ndices
Honey Bee genome
Human
Projects:
NIH
|
DOE
|
UK
Maps:
RH map
|
99 map
|
Launchpad
Genes:
Gene Indices (HsGI)
Phenotypes:
Associatn db
|
Genome:
Ensembl
|
Pharm
|
GDB
AgEncode
ENCyclopedia Of DNA Elements
EnCode explorer
modEncode
ENCODE data
FAANG